Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp(+) reductase | A5893_03870 | Not Available | Negative | 948045 - 949049 | 36749.5 |
| marr family transcriptional regulator | A5893_03875 | Not Available | Negative | 949061 - 949495 | 17003.2 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | A5893_03880 | Not Available | Negative | 949562 - 950569 | 37924.7 |
| abc transporter permease | A5893_03885 | Not Available | Negative | 950848 - 951792 | 34232.1 |
| n-acetylmuramoyl-l-alanine amidase | A5893_03890 | Not Available | Negative | 951822 - 952682 | 31805.4 |
| hypothetical protein | A5893_03895 | Not Available | Positive | 952733 - 955390 | 99786.7 |
| damage-inducible protein cina | A5893_03900 | Not Available | Positive | 955393 - 956643 | 45615.6 |
| diapophytoene dehydrogenase | A5893_03905 | Not Available | Positive | 956975 - 958363 | 50910.5 |
| hypothetical protein | A5893_03910 | Not Available | Negative | 958554 - 964145 | 208221.0 |
| hypothetical protein | A5893_03915 | Not Available | Negative | 964464 - 965012 | 20472.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
