Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | A5893_03820 | Not Available | Negative | 938588 - 939475 | 34128.9 |
| duf4440 domain-containing protein | A5893_03825 | Not Available | Negative | 939481 - 939903 | 17118.1 |
| alkylhydroperoxidase | A5893_03830 | Not Available | Negative | 939971 - 940501 | 19338.0 |
| iduronate sulfatase | A5893_03835 | Not Available | Negative | 940759 - 940950 | 7124.22 |
| restriction endonuclease | A5893_03840 | Not Available | Negative | 941117 - 942187 | 41629.8 |
| hypothetical protein | A5893_03845 | Not Available | Negative | 942369 - 942872 | 18514.3 |
| hypothetical protein | A5893_03850 | Not Available | Negative | 943049 - 943411 | 13294.0 |
| 30s ribosomal protein s1 | A5893_03855 | Not Available | Negative | 943569 - 945518 | 72591.5 |
| nadh dehydrogenase | A5893_03860 | Not Available | Negative | 946182 - 947480 | 49056.1 |
| ferredoxin | A5893_03865 | Not Available | Negative | 947716 - 948036 | 11695.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
