Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | A5893_03770 | Not Available | Positive | 927046 - 928146 | 40157.2 |
| Trna-arg | Not Available | Not Available | Positive | 928261 - 928332 | Not Available |
| hypothetical protein | A5893_03780 | Not Available | Negative | 928434 - 928817 | 14168.2 |
| hypothetical protein | A5893_03785 | Not Available | Negative | 928993 - 929754 | 28804.6 |
| hypothetical protein | A5893_03790 | Not Available | Negative | 929759 - 932536 | 104753.0 |
| x-pro dipeptidyl-peptidase | A5893_03795 | Not Available | Positive | 932810 - 934672 | 71451.6 |
| peptidase m1 | A5893_03800 | Not Available | Positive | 935045 - 936697 | 62903.6 |
| hypothetical protein | A5893_03805 | Not Available | Positive | 936747 - 937466 | 24699.2 |
| transcriptional regulator | A5893_03810 | Not Available | Negative | 937548 - 937874 | 12522.1 |
| addiction module toxin rele | A5893_03815 | Not Available | Negative | 937876 - 938220 | 13710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
