Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_03720 | Not Available | Negative | 910725 - 911132 | 16120.5 |
| hypothetical protein | A5893_03725 | Not Available | Positive | 911346 - 912194 | 33283.3 |
| hypothetical protein | A5893_03730 | Not Available | Positive | 912225 - 913388 | 45172.9 |
| hypothetical protein | A5893_03735 | Not Available | Positive | 913390 - 914598 | 46227.0 |
| hypothetical protein | A5893_03740 | Not Available | Negative | 914591 - 919456 | 181894.0 |
| phosphoribosylformylglycinamidine synthase ii | A5893_03745 | Not Available | Positive | 919545 - 921767 | 80522.6 |
| hypothetical protein | A5893_03750 | Not Available | Negative | 921841 - 922272 | 15585.9 |
| abc-f family atpase | A5893_03755 | Not Available | Negative | 922450 - 924081 | 61445.1 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | A5893_03760 | Not Available | Positive | 924293 - 926134 | 68336.7 |
| hypothetical protein | A5893_03765 | Not Available | Negative | 926131 - 926565 | 16509.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
