Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | A5893_03570 | Not Available | Positive | 878376 - 878909 | 19689.8 |
| hypothetical protein | A5893_03575 | Not Available | Negative | 878974 - 879429 | 16865.5 |
| nucleotide-binding protein | A5893_03580 | Not Available | Positive | 879653 - 880153 | 18753.4 |
| hypothetical protein | A5893_03585 | Not Available | Positive | 880270 - 883383 | 120627.0 |
| amp-dependent synthetase | A5893_03590 | Not Available | Negative | 883424 - 885208 | 67367.8 |
| hypothetical protein | A5893_03595 | Not Available | Positive | 885522 - 885980 | 16768.9 |
| hypothetical protein | A5893_03600 | Not Available | Negative | 886060 - 887523 | 53526.7 |
| hypothetical protein | A5893_03605 | Not Available | Negative | 887535 - 888638 | 41318.2 |
| proline--trna ligase | A5893_03610 | Not Available | Positive | 888679 - 890151 | 55742.3 |
| cystathionine gamma-synthase | A5893_03615 | Not Available | Positive | 890290 - 891429 | 41980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
