Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_03470 | Not Available | Negative | 858092 - 858766 | 26822.2 |
| tyrosine--trna ligase | A5893_03475 | Not Available | Positive | 858867 - 860150 | 47863.1 |
| hypothetical protein | A5893_03480 | Not Available | Negative | 860162 - 860713 | 21364.1 |
| acyl transferase | A5893_03485 | Not Available | Negative | 860739 - 861707 | 36866.1 |
| glycosyl hydrolase | A5893_03490 | Not Available | Positive | 861991 - 864456 | 95811.2 |
| glycogen-branching enzyme | A5893_03495 | Not Available | Positive | 864789 - 866747 | 75859.2 |
| hypothetical protein | A5893_03500 | Not Available | Negative | 866779 - 867927 | 44083.3 |
| hypothetical protein | A5893_03505 | Not Available | Negative | 868037 - 868531 | 18767.2 |
| peroxidase | A5893_03510 | Not Available | Positive | 868909 - 869544 | 23352.7 |
| cold-shock protein | A5893_03515 | Not Available | Positive | 869661 - 869855 | 7118.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
