Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | A5893_03420 | Not Available | Positive | 847187 - 848089 | 34013.4 |
| hypothetical protein | A5893_03425 | Not Available | Positive | 848251 - 849630 | 49589.3 |
| mfs transporter | A5893_03430 | Not Available | Negative | 849935 - 851209 | 46427.4 |
| tetracycline resistance mfs efflux pump | A5893_03435 | Not Available | Negative | 851384 - 852598 | 43628.4 |
| hypothetical protein | A5893_03440 | Not Available | Negative | 852637 - 853170 | 20815.2 |
| phosphoglycerate mutase (2,3-diphosphoglycerate-independent) | A5893_03445 | Not Available | Negative | 853171 - 854691 | 55693.4 |
| hypothetical protein | A5893_03450 | Not Available | Negative | 854827 - 855138 | 11639.6 |
| peptidoglycan-binding protein | A5893_03455 | Not Available | Positive | 855324 - 856751 | 54438.9 |
| hypothetical protein | A5893_03460 | Not Available | Negative | 856746 - 857009 | 9715.5 |
| hypothetical protein | A5893_03465 | Not Available | Negative | 857010 - 858092 | 39361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
