Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | A5893_03370 | Not Available | Positive | 834827 - 836974 | 77845.5 |
| excinuclease abc subunit c | A5893_03375 | Not Available | Negative | 837377 - 837664 | 11410.5 |
| hypothetical protein | A5893_03380 | Not Available | Negative | 837824 - 838882 | 40943.4 |
| deacetylase | A5893_03385 | Not Available | Negative | 838886 - 839788 | 33871.7 |
| hypothetical protein | A5893_03390 | Not Available | Negative | 839789 - 840598 | 30838.6 |
| kynureninase | A5893_03395 | Not Available | Negative | 840716 - 841975 | 47558.0 |
| hypothetical protein | A5893_03400 | Not Available | Negative | 842107 - 842595 | 18515.8 |
| pyridoxamine 5'-phosphate oxidase | A5893_03405 | Not Available | Negative | 842627 - 843130 | 19235.8 |
| peptidase m42 | A5893_03410 | Not Available | Positive | 843475 - 844593 | 41709.9 |
| aminoacyl peptidase | A5893_03415 | Not Available | Positive | 844600 - 847056 | 93574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
