Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | A5893_03320 | Not Available | Negative | 825548 - 825802 | 9406.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | A5893_03325 | Not Available | Negative | 825799 - 826470 | 24932.4 |
| transcription termination factor rho | A5893_03330 | Not Available | Negative | 826556 - 828127 | 58625.8 |
| orotidine 5'-phosphate decarboxylase | A5893_03335 | Not Available | Positive | 828353 - 829180 | 30608.7 |
| hypothetical protein | A5893_03340 | Not Available | Positive | 829700 - 830221 | 19478.3 |
| hypothetical protein | A5893_03345 | Not Available | Negative | 830289 - 830627 | 12205.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | A5893_03350 | Not Available | Negative | 830707 - 831756 | 39058.1 |
| hypothetical protein | A5893_03355 | Not Available | Positive | 831944 - 832288 | 13054.8 |
| hypothetical protein | A5893_03360 | Not Available | Negative | 832392 - 833087 | 25706.7 |
| hypothetical protein | A5893_03365 | Not Available | Negative | 833302 - 833793 | 18347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
