Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane glycosyltransferase | A5893_03270 | Not Available | Positive | 816134 - 817258 | 43777.4 |
| rna polymerase subunit sigma-24 | A5893_03275 | Not Available | Positive | 817249 - 817863 | 23562.2 |
| 16s rrna methyltransferase g | A5893_03280 | Not Available | Positive | 817853 - 818485 | 24186.2 |
| dna processing protein dpra | A5893_03285 | Not Available | Positive | 818503 - 819591 | 40049.8 |
| histidine phosphatase family protein | A5893_03290 | Not Available | Negative | 819588 - 820091 | 18690.5 |
| glycosyl transferase | A5893_03295 | Not Available | Negative | 820084 - 821025 | 35527.8 |
| dna polymerase iv | A5893_03300 | Not Available | Negative | 821074 - 822756 | 63821.2 |
| signal peptide peptidase sppa | A5893_03305 | Not Available | Negative | 822840 - 824600 | 64480.0 |
| hypothetical protein | A5893_03310 | Not Available | Positive | 824679 - 825176 | 19235.7 |
| histidine phosphotransferase | A5893_03315 | Not Available | Positive | 825183 - 825551 | 14039.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
