Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidinotransferase | A5893_03220 | Not Available | Negative | 802862 - 804313 | 55088.2 |
| arginine--trna ligase | A5893_03225 | Not Available | Positive | 804494 - 806263 | 67339.8 |
| hypothetical protein | A5893_03230 | Not Available | Negative | 806320 - 807438 | 43408.4 |
| smc-scp complex subunit scpb | A5893_03235 | Not Available | Negative | 807809 - 808366 | 21003.4 |
| dehypoxanthine futalosine cyclase | A5893_03240 | Not Available | Negative | 808424 - 809548 | 42562.2 |
| hypothetical protein | A5893_03245 | Not Available | Positive | 810098 - 812965 | 103257.0 |
| thymidine kinase | A5893_03250 | Not Available | Negative | 813063 - 813635 | 21164.5 |
| hypothetical protein | A5893_03255 | Not Available | Positive | 813731 - 814717 | 38510.3 |
| glycoside hydrolase | A5893_03260 | Not Available | Positive | 814752 - 815627 | 34220.3 |
| secondary thiamine-phosphate synthase | A5893_03265 | Not Available | Positive | 815630 - 816052 | 15932.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
