Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha | A5893_03170 | Not Available | Negative | 790142 - 790879 | 26304.7 |
| hypothetical protein | A5893_03175 | Not Available | Positive | 791018 - 791344 | 12872.2 |
| chromate transporter | A5893_03180 | Not Available | Positive | 791491 - 792702 | 44153.8 |
| glycosidase | A5893_03185 | Not Available | Positive | 792748 - 794211 | 56195.3 |
| glycosyl transferase | A5893_03190 | Not Available | Negative | 794216 - 795223 | 37579.0 |
| glycosyl transferase | A5893_03195 | Not Available | Negative | 795223 - 797484 | 86187.4 |
| signal transduction protein | A5893_03200 | Not Available | Negative | 797644 - 799554 | 73997.3 |
| hypothetical protein | A5893_03205 | Not Available | Negative | 799544 - 800251 | 27759.9 |
| arginine decarboxylase | A5893_03210 | Not Available | Negative | 800319 - 801710 | 54163.6 |
| amidinotransferase | A5893_03215 | Not Available | Negative | 801840 - 802754 | 34439.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
