Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-selenouridine(34) synthase mnmh | A5893_03120 | Not Available | Positive | 777279 - 778310 | 39108.2 |
| selenide,water dikinase seld | A5893_03125 | Not Available | Positive | 778303 - 779346 | 36912.3 |
| glutamine synthetase | A5893_03130 | Not Available | Negative | 779412 - 781583 | 81055.2 |
| ammonium transporter | A5893_03135 | Not Available | Positive | 782138 - 783406 | 44483.4 |
| hypothetical protein | A5893_03140 | Not Available | Positive | 783493 - 784539 | 36555.9 |
| rna polymerase subunit sigma | A5893_03145 | Not Available | Negative | 784681 - 785541 | 32656.9 |
| hypothetical protein | A5893_03150 | Not Available | Negative | 785727 - 786746 | 39731.6 |
| nucleoside permease | A5893_03155 | Not Available | Negative | 786753 - 787997 | 46133.5 |
| hypothetical protein | A5893_03160 | Not Available | Negative | 788093 - 788683 | 21820.2 |
| electron transfer flavoprotein subunit alpha | A5893_03165 | Not Available | Negative | 789006 - 789980 | 34368.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
