Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_03075 | Not Available | Positive | 770065 - 770766 | 27165.8 |
| hypothetical protein | A5893_03080 | Not Available | Positive | 770863 - 771156 | 11164.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 772020 - 772406 | Not Available |
| hypothetical protein | A5893_03085 | Not Available | Negative | 771826 - 772206 | 12979.9 |
| adenosylhomocysteinase | A5893_03090 | Not Available | Positive | 772399 - 773715 | 47867.3 |
| hypothetical protein | A5893_03095 | Not Available | Positive | 773974 - 774303 | 13263.8 |
| hypothetical protein | A5893_03100 | Not Available | Positive | 774300 - 774974 | 26142.8 |
| molecular chaperone dnaj | A5893_03105 | Not Available | Positive | 775140 - 775589 | 17339.4 |
| ketoacyl reductase | A5893_03110 | Not Available | Negative | 775644 - 776456 | 29491.6 |
| pyridoxine 5'-phosphate synthase | A5893_03115 | Not Available | Positive | 776556 - 777278 | 27192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
