Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylisocitrate lyase | A5893_02975 | Not Available | Positive | 749763 - 751082 | 49021.4 |
| transposase | A5893_02980 | Not Available | Positive | 751748 - 752302 | 21887.2 |
| hypothetical protein | A5893_02985 | Not Available | Negative | 752480 - 753346 | 33829.7 |
| hypothetical protein | A5893_02990 | Not Available | Negative | 753607 - 754107 | 19464.4 |
| hypothetical protein | A5893_02995 | Not Available | Negative | 754116 - 754484 | 14572.7 |
| mbl fold metallo-hydrolase | A5893_03000 | Not Available | Negative | 754606 - 755685 | 41210.6 |
| 6-phosphogluconate dehydrogenase | A5893_03005 | Not Available | Negative | 755685 - 756566 | 31946.7 |
| nadh:ubiquinone oxidoreductase | A5893_03010 | Not Available | Negative | 756826 - 757203 | 14748.0 |
| hypothetical protein | A5893_03015 | Not Available | Negative | 757518 - 757829 | 11850.7 |
| hypothetical protein | A5893_03020 | Not Available | Negative | 757833 - 760682 | 108994.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
