Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_02925 | Not Available | Negative | 737144 - 737707 | 20793.6 |
| potassium transporter kup | A5893_02930 | Not Available | Positive | 737891 - 739843 | 73590.3 |
| hypothetical protein | A5893_02935 | Not Available | Positive | 739849 - 740430 | 22325.5 |
| helicase | A5893_02940 | Not Available | Negative | 740439 - 742889 | 93092.9 |
| flavodoxin reductase | A5893_02945 | Not Available | Negative | 743031 - 743702 | 25360.0 |
| d-mannonate oxidoreductase | A5893_02950 | Not Available | Positive | 743911 - 744732 | 28807.5 |
| mannonate dehydratase | A5893_02955 | Not Available | Positive | 744762 - 745919 | 43936.6 |
| sodium transporter | A5893_02960 | Not Available | Positive | 746201 - 747871 | 60629.5 |
| hypothetical protein | A5893_02965 | Not Available | Positive | 748029 - 748331 | 10997.6 |
| paraquat-inducible protein a | A5893_02970 | Not Available | Positive | 748387 - 749715 | 50207.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
