Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_02820 | Not Available | Positive | 714272 - 715291 | 37511.7 |
| phosphoribosylglycinamide formyltransferase | A5893_02825 | Not Available | Negative | 715296 - 715877 | 21992.8 |
| protease | A5893_02830 | Not Available | Positive | 716108 - 716644 | 19733.7 |
| hypothetical protein | A5893_02840 | Not Available | Negative | 717164 - 717679 | 20203.2 |
| hypothetical protein | A5893_02845 | Not Available | Negative | 717801 - 718463 | 25017.8 |
| amino acid transporter | A5893_02850 | Not Available | Negative | 718603 - 720309 | 62621.6 |
| sulfatase | A5893_02855 | Not Available | Negative | 720384 - 722300 | 73601.1 |
| sodium-independent anion transporter | A5893_02860 | Not Available | Negative | 722367 - 723905 | 55275.4 |
| phytoene dehydrogenase | A5893_02865 | Not Available | Negative | 724180 - 725664 | 56434.3 |
| phytoene synthase | A5893_02870 | Not Available | Positive | 725760 - 726593 | 32233.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
