Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | A5893_02770 | Not Available | Negative | 699041 - 699718 | 25635.4 |
| hypothetical protein | A5893_02775 | Not Available | Positive | 699799 - 700362 | 21571.0 |
| hypothetical protein | A5893_02780 | Not Available | Negative | 700443 - 700652 | 8180.42 |
| hypothetical protein | A5893_02785 | Not Available | Positive | 700845 - 701501 | 25910.2 |
| lysine--trna ligase | A5893_02790 | Not Available | Negative | 701862 - 703580 | 65667.0 |
| rna methyltransferase | A5893_02795 | Not Available | Negative | 703814 - 704344 | 19895.8 |
| helicase | A5893_02800 | Not Available | Positive | 704580 - 705902 | 49561.4 |
| yhs domain protein | A5893_02805 | Not Available | Positive | 705955 - 706410 | 17259.6 |
| hypothetical protein | A5893_02810 | Not Available | Positive | 706554 - 710666 | 148878.0 |
| hypothetical protein | A5893_02815 | Not Available | Positive | 710766 - 714275 | 127321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
