Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | A5893_02620 | Not Available | Positive | 644745 - 645533 | 28603.3 |
| alpha-hydroxy-acid oxidizing enzyme | A5893_02625 | Not Available | Positive | 645599 - 646759 | 43137.4 |
| hypothetical protein | A5893_02630 | Not Available | Positive | 647392 - 648786 | 51932.5 |
| hypothetical protein | A5893_02635 | Not Available | Positive | 648791 - 649636 | 31004.7 |
| hypothetical protein | A5893_02640 | Not Available | Positive | 649699 - 650910 | 45690.0 |
| hypothetical protein | A5893_02645 | Not Available | Positive | 651166 - 655332 | 157673.0 |
| hypothetical protein | A5893_02650 | Not Available | Negative | 655892 - 657565 | 58001.2 |
| hypothetical protein | A5893_02655 | Not Available | Negative | 657642 - 660878 | 117395.0 |
| hypothetical protein | A5893_02660 | Not Available | Positive | 661297 - 664353 | 111107.0 |
| hypothetical protein | A5893_02665 | Not Available | Positive | 664356 - 665939 | 58818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
