Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_02460 | Not Available | Positive | 595109 - 596602 | 55318.8 |
| hypothetical protein | A5893_02465 | Not Available | Positive | 596658 - 598559 | 73204.9 |
| proline hydroxylase | A5893_02470 | Not Available | Positive | 598738 - 599574 | 31253.1 |
| oxidoreductase | A5893_02480 | Not Available | Positive | 600557 - 601759 | 45204.8 |
| gmc family oxidoreductase | A5893_02485 | Not Available | Positive | 601772 - 603469 | 62916.5 |
| hypothetical protein | A5893_02490 | Not Available | Positive | 603554 - 604693 | 41610.8 |
| hypothetical protein | A5893_02495 | Not Available | Positive | 604690 - 605268 | 21753.4 |
| hypothetical protein | A5893_02500 | Not Available | Negative | 605280 - 605924 | 24363.5 |
| xylose isomerase | A5893_02505 | Not Available | Positive | 606126 - 606947 | 31825.6 |
| glucuronyl hydrolase | A5893_02510 | Not Available | Positive | 607049 - 608221 | 44993.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
