Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_02205 | Not Available | Negative | 524798 - 525316 | 20161.0 |
| hypothetical protein | A5893_02210 | Not Available | Negative | 525328 - 526290 | 36900.1 |
| hypothetical protein | A5893_02215 | Not Available | Negative | 526626 - 527342 | 27298.9 |
| hypothetical protein | A5893_02220 | Not Available | Negative | 527617 - 527988 | 13990.8 |
| polyketide cyclase | A5893_02225 | Not Available | Negative | 527985 - 528464 | 18438.8 |
| cyclic nucleotide-binding protein | A5893_02230 | Not Available | Negative | 528530 - 529108 | 22805.5 |
| hypothetical protein | A5893_02235 | Not Available | Negative | 530587 - 531432 | 33485.1 |
| hypothetical protein | A5893_02240 | Not Available | Negative | 531633 - 532664 | 38487.2 |
| hypothetical protein | A5893_02245 | Not Available | Positive | 533417 - 537214 | 146780.0 |
| hypothetical protein | A5893_02250 | Not Available | Negative | 537192 - 538067 | 34074.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
