Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | A5893_02155 | Not Available | Negative | 517078 - 517254 | 6433.72 |
| hypothetical protein | A5893_02160 | Not Available | Negative | 517537 - 518115 | 22411.2 |
| doxx-like family protein | A5893_02165 | Not Available | Negative | 518119 - 518514 | 14622.4 |
| atpase | A5893_02170 | Not Available | Negative | 518504 - 518986 | 18816.8 |
| transcriptional regulator | A5893_02175 | Not Available | Negative | 518993 - 519316 | 12452.3 |
| arac family transcriptional regulator | A5893_02180 | Not Available | Negative | 519797 - 520678 | 33862.4 |
| duf4440 domain-containing protein | A5893_02185 | Not Available | Negative | 520690 - 521106 | 16934.9 |
| alkylhydroperoxidase | A5893_02190 | Not Available | Negative | 521166 - 521699 | 19396.4 |
| hypothetical protein | A5893_02195 | Not Available | Negative | 521985 - 523415 | 54557.6 |
| hypothetical protein | A5893_02200 | Not Available | Negative | 523877 - 524629 | 28732.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
