Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_02105 | Not Available | Negative | 504527 - 505150 | 24304.7 |
| hypothetical protein | A5893_02110 | Not Available | Negative | 505158 - 505529 | 14710.6 |
| conjugal transfer protein trai | A5893_02115 | Not Available | Negative | 505794 - 506474 | 26374.4 |
| conjugal transfer protein trag | A5893_02120 | Not Available | Negative | 506471 - 508927 | 93920.5 |
| hypothetical protein | A5893_02125 | Not Available | Negative | 508917 - 509252 | 12835.2 |
| dna methylase | A5893_02130 | Not Available | Negative | 509254 - 514731 | 207991.0 |
| hypothetical protein | A5893_02135 | Not Available | Negative | 514741 - 515175 | 16798.1 |
| carbamoyl phosphate synthetase | A5893_02140 | Not Available | Negative | 515189 - 515512 | 11535.3 |
| hypothetical protein | A5893_02145 | Not Available | Negative | 515666 - 516127 | 17371.3 |
| dna repair protein | A5893_02150 | Not Available | Positive | 516476 - 516949 | 17302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
