Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter | A5893_02055 | Not Available | Negative | 495890 - 497368 | 53502.6 |
| Trna-pro | Not Available | Not Available | Positive | 497778 - 497853 | Not Available |
| integrase | A5893_02065 | Not Available | Positive | 498394 - 499623 | 47552.2 |
| transcriptional regulator | A5893_02070 | Not Available | Negative | 499734 - 500006 | 10553.9 |
| hypothetical protein | A5893_02075 | Not Available | Negative | 500159 - 500440 | 11061.5 |
| hypothetical protein | A5893_02080 | Not Available | Negative | 500457 - 501239 | 30370.6 |
| hypothetical protein | A5893_02085 | Not Available | Negative | 501261 - 502337 | 40225.9 |
| hypothetical protein | A5893_02090 | Not Available | Negative | 502340 - 502675 | 12620.1 |
| conjugative transposon protein trak | A5893_02095 | Not Available | Negative | 502672 - 503295 | 23952.7 |
| conjugative transposon protein traj | A5893_02100 | Not Available | Negative | 503317 - 504510 | 43473.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
