Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_01905 | Not Available | Negative | 463471 - 464169 | 25684.7 |
| dna polymerase iii subunit beta | A5893_01910 | Not Available | Negative | 464381 - 465505 | 41330.5 |
| gliding motility-associated abc transporter substrate-binding protein gldg | A5893_01915 | Not Available | Negative | 465550 - 467244 | 63678.2 |
| gliding motility-associated abc transporter permease subunit gldf | A5893_01920 | Not Available | Negative | 467238 - 467966 | 27026.5 |
| multidrug abc transporter atp-binding protein | A5893_01925 | Not Available | Negative | 468224 - 468931 | 26117.9 |
| hypothetical protein | A5893_01930 | Not Available | Positive | 469315 - 470496 | 44506.0 |
| hypothetical protein | A5893_01935 | Not Available | Negative | 470584 - 471102 | 19347.3 |
| collagen-binding protein | A5893_01940 | Not Available | Positive | 471285 - 473624 | 87561.4 |
| hypothetical protein | A5893_01945 | Not Available | Positive | 473628 - 474416 | 29304.6 |
| polysaccharide deacetylase | A5893_01950 | Not Available | Negative | 474499 - 475401 | 33767.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
