Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_01805 | Not Available | Positive | 439257 - 439805 | 20827.5 |
| osmotically inducible protein osmc | A5893_01810 | Not Available | Positive | 439849 - 440256 | 14771.6 |
| hypothetical protein | A5893_01815 | Not Available | Negative | 440364 - 444113 | 142498.0 |
| hypothetical protein | A5893_01820 | Not Available | Negative | 444103 - 445008 | 34469.2 |
| hypothetical protein | A5893_01825 | Not Available | Positive | 445109 - 446302 | 46121.4 |
| hypothetical protein | A5893_01830 | Not Available | Negative | 446417 - 446950 | 20380.0 |
| ssra-binding protein | A5893_01835 | Not Available | Negative | 447052 - 447507 | 17479.3 |
| histidinol phosphate phosphatase | A5893_01840 | Not Available | Negative | 447629 - 448114 | 18104.7 |
| glutamate synthase subunit alpha | A5893_01845 | Not Available | Positive | 448471 - 452991 | 166898.0 |
| glutamate synthase | A5893_01850 | Not Available | Positive | 452993 - 454474 | 54780.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
