Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_01755 | Not Available | Negative | 429304 - 429861 | 20474.1 |
| hypothetical protein | A5893_01760 | Not Available | Negative | 429836 - 431152 | 50013.6 |
| rna polymerase subunit sigma-70 | A5893_01765 | Not Available | Negative | 431166 - 431705 | 21210.8 |
| glutamate/aspartate:proton symporter gltp | A5893_01770 | Not Available | Positive | 432078 - 433340 | 45759.6 |
| succinate--coa ligase subunit alpha | A5893_01775 | Not Available | Positive | 433415 - 434287 | 30063.9 |
| hypothetical protein | A5893_01780 | Not Available | Negative | 434364 - 436595 | 84574.9 |
| hypothetical protein | A5893_01785 | Not Available | Positive | 436775 - 437017 | 8704.72 |
| hypothetical protein | A5893_01790 | Not Available | Positive | 437214 - 437651 | 16553.6 |
| hypothetical protein | A5893_01795 | Not Available | Positive | 437683 - 438459 | 29002.6 |
| hypothetical protein | A5893_01800 | Not Available | Positive | 438479 - 438931 | 17263.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
