Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | A5893_01655 | Not Available | Negative | 408408 - 409667 | 46542.7 |
| penicillin-binding protein 2 | A5893_01660 | Not Available | Negative | 409671 - 411596 | 72541.5 |
| rod shape-determining protein mred | A5893_01665 | Not Available | Negative | 411593 - 412108 | 20033.4 |
| rod shape-determining protein mrec | A5893_01670 | Not Available | Negative | 412101 - 412940 | 31147.6 |
| sodium:proton antiporter | A5893_01675 | Not Available | Negative | 413178 - 414365 | 44478.4 |
| gnat family acetyltransferase | A5893_01680 | Not Available | Positive | 414659 - 415087 | 16011.4 |
| hypothetical protein | A5893_01685 | Not Available | Positive | 415084 - 416229 | 42914.3 |
| hypothetical protein | A5893_01690 | Not Available | Positive | 416248 - 417396 | 43092.8 |
| amino-acid racemase | A5893_01695 | Not Available | Positive | 417396 - 418466 | 40384.5 |
| cation transporter | A5893_01700 | Not Available | Negative | 418621 - 418950 | 12100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
