Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_01605 | Not Available | Negative | 397341 - 397628 | 11026.2 |
| tetr family transcriptional regulator | A5893_01610 | Not Available | Negative | 397800 - 398483 | 27118.6 |
| hypothetical protein | A5893_01615 | Not Available | Positive | 398608 - 400281 | 63210.2 |
| hypothetical protein | A5893_01620 | Not Available | Positive | 400291 - 401634 | 50758.9 |
| hypothetical protein | A5893_01625 | Not Available | Positive | 401657 - 403015 | 51798.3 |
| mechanosensitive ion channel protein mscs | A5893_01630 | Not Available | Negative | 403012 - 403857 | 31430.4 |
| aminotransferase class iii | A5893_01635 | Not Available | Negative | 403909 - 405093 | 43485.9 |
| hypothetical protein | A5893_01640 | Not Available | Positive | 405176 - 405403 | 8368.16 |
| hypothetical protein | A5893_01645 | Not Available | Positive | 405424 - 406143 | 27791.4 |
| radical sam protein | A5893_01650 | Not Available | Positive | 406205 - 408397 | 83929.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
