Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_01505 | Not Available | Positive | 374849 - 378244 | 124163.0 |
| hypothetical protein | A5893_01510 | Not Available | Positive | 378247 - 379038 | 30512.8 |
| hypothetical protein | A5893_01515 | Not Available | Positive | 379145 - 379852 | 26573.3 |
| hypothetical protein | A5893_01520 | Not Available | Negative | 379880 - 381931 | 78245.7 |
| hypothetical protein | A5893_01525 | Not Available | Negative | 381946 - 382287 | 12968.6 |
| glycosyl transferase family 2 | A5893_01530 | Not Available | Negative | 382291 - 383001 | 26862.7 |
| hypothetical protein | A5893_01535 | Not Available | Negative | 383182 - 384405 | 46946.5 |
| gnat family acetyltransferase | A5893_01540 | Not Available | Negative | 384450 - 384902 | 17243.9 |
| hypothetical protein | A5893_01545 | Not Available | Negative | 384915 - 385931 | 38645.1 |
| hypothetical protein | A5893_01550 | Not Available | Negative | 385909 - 387084 | 43300.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
