Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | A5893_01455 | Not Available | Positive | 354955 - 355620 | 24837.2 |
| hypothetical protein | A5893_01460 | Not Available | Positive | 355910 - 356896 | 35986.1 |
| hypothetical protein | A5893_01465 | Not Available | Positive | 356937 - 357701 | 28455.8 |
| hypothetical protein | A5893_01470 | Not Available | Positive | 357908 - 362917 | 176928.0 |
| hypothetical protein | A5893_01475 | Not Available | Positive | 363079 - 365055 | 74282.2 |
| hypothetical protein | A5893_01480 | Not Available | Positive | 365178 - 365522 | 13570.2 |
| acriflavine resistance protein b | A5893_01485 | Not Available | Positive | 365608 - 369939 | 160302.0 |
| efflux transporter periplasmic adaptor subunit | A5893_01490 | Not Available | Positive | 369947 - 371077 | 41845.4 |
| hypothetical protein | A5893_01495 | Not Available | Negative | 371157 - 371576 | 15312.6 |
| glycine dehydrogenase (aminomethyl-transferring) | A5893_01500 | Not Available | Negative | 371720 - 374605 | 106171.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
