Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | A5893_01405 | Not Available | Positive | 343562 - 344347 | 28493.2 |
| translation initiation factor if-1 | A5893_01410 | Not Available | Positive | 344419 - 344637 | 8352.3 |
| 30s ribosomal protein s13 | A5893_01415 | Not Available | Positive | 344780 - 345157 | 14268.5 |
| 30s ribosomal protein s11 | A5893_01420 | Not Available | Positive | 345174 - 345563 | 13929.0 |
| 30s ribosomal protein s4 | A5893_01425 | Not Available | Positive | 345629 - 346237 | 23015.8 |
| dna-directed rna polymerase subunit alpha | A5893_01430 | Not Available | Positive | 346311 - 347303 | 37184.7 |
| 50s ribosomal protein l17 | A5893_01435 | Not Available | Positive | 347411 - 348010 | 22408.6 |
| peptidase m1 | A5893_01440 | Not Available | Negative | 348334 - 350850 | 94951.0 |
| hypothetical protein | A5893_01445 | Not Available | Positive | 351008 - 353164 | 82131.0 |
| hypothetical protein | A5893_01450 | Not Available | Positive | 353151 - 354914 | 66447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
