Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | A5893_01300 | Not Available | Positive | 333278 - 333895 | 22088.8 |
| 50s ribosomal protein l4 | A5893_01305 | Not Available | Positive | 333895 - 334524 | 22858.6 |
| 50s ribosomal protein l23 | A5893_01310 | Not Available | Positive | 334526 - 334816 | 10782.3 |
| 50s ribosomal protein l2 | A5893_01315 | Not Available | Positive | 334824 - 335648 | 29790.2 |
| 30s ribosomal protein s19 | A5893_01320 | Not Available | Positive | 335648 - 335914 | 10001.1 |
| 50s ribosomal protein l22 | A5893_01325 | Not Available | Positive | 335918 - 336283 | 13750.8 |
| 30s ribosomal protein s3 | A5893_01330 | Not Available | Positive | 336290 - 337093 | 28915.1 |
| 50s ribosomal protein l29 | A5893_01340 | Not Available | Positive | 337563 - 337775 | 7903.43 |
| 30s ribosomal protein s17 | A5893_01345 | Not Available | Positive | 337790 - 338044 | 9773.16 |
| 50s ribosomal protein l14 | A5893_01350 | Not Available | Positive | 338046 - 338414 | 13367.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
