Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16900 | Not Available | Negative | 3983502 - 3986726 | 119746.0 |
| hypothetical protein | A5893_16905 | Not Available | Negative | 3988210 - 3990141 | 70149.3 |
| hypothetical protein | A5893_16910 | Not Available | Negative | 3990166 - 3991008 | 31201.5 |
| neuraminidase | A5893_16915 | Not Available | Negative | 3991505 - 3992785 | 48460.4 |
| hypothetical protein | A5893_16920 | Not Available | Negative | 3993137 - 3994015 | 34628.1 |
| hypothetical protein | A5893_16925 | Not Available | Negative | 3994012 - 3995229 | 47694.0 |
| rhodopsin | A5893_16930 | Not Available | Negative | 3995369 - 3996103 | 26913.3 |
| glucose transporter | A5893_16935 | Not Available | Negative | 3996408 - 3998009 | 57674.5 |
| integrase | A5893_16940 | Not Available | Positive | 3998354 - 3999136 | 31191.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
