Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16790 | Not Available | Positive | 3951280 - 3952467 | 44770.0 |
| hypothetical protein | A5893_16795 | Not Available | Positive | 3952471 - 3954546 | 79542.1 |
| mfs transporter | A5893_16800 | Not Available | Positive | 3954809 - 3956131 | 48853.3 |
| n-acetylglucosamine-6-phosphate deacetylase | A5893_16805 | Not Available | Positive | 3956155 - 3957357 | 43301.0 |
| laci family transcriptional regulator | A5893_16810 | Not Available | Positive | 3957728 - 3958744 | 37776.2 |
| glucosamine-6-phosphate deaminase | A5893_16815 | Not Available | Positive | 3959220 - 3959975 | 28172.8 |
| hypothetical protein | A5893_16830 | Not Available | Negative | 3961161 - 3962396 | 46341.8 |
| hypothetical protein | A5893_16835 | Not Available | Negative | 3962429 - 3964969 | 95867.8 |
| hypothetical protein | A5893_16840 | Not Available | Negative | 3964991 - 3965416 | 16189.3 |
| hypothetical protein | A5893_16845 | Not Available | Negative | 3965410 - 3966495 | 40105.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
