Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | A5893_16740 | Not Available | Negative | 3936125 - 3936496 | 14052.3 |
| hypothetical protein | A5893_16745 | Not Available | Negative | 3937378 - 3937902 | 20458.7 |
| hypothetical protein | A5893_16750 | Not Available | Negative | 3937889 - 3938128 | 9919.52 |
| rhamnogalacturonan acetylesterase | A5893_16755 | Not Available | Negative | 3938234 - 3939001 | 29012.0 |
| rhamnogalacturonan acetylesterase | A5893_16760 | Not Available | Negative | 3939006 - 3939752 | 28149.8 |
| susc/raga family protein | A5893_16765 | Not Available | Positive | 3940035 - 3943283 | 119316.0 |
| carbohydrate-binding protein susd | A5893_16770 | Not Available | Positive | 3943295 - 3945055 | 66440.4 |
| hypothetical protein | A5893_16775 | Not Available | Positive | 3945153 - 3948416 | 118948.0 |
| hypothetical protein | A5893_16780 | Not Available | Positive | 3948419 - 3948991 | 21597.1 |
| hypothetical protein | A5893_16785 | Not Available | Positive | 3949003 - 3950901 | 67642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
