Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | A5893_16640 | Not Available | Positive | 3913102 - 3914805 | 63644.0 |
| hypothetical protein | A5893_16645 | Not Available | Negative | 3915033 - 3916907 | 71172.1 |
| transcriptional regulator | A5893_16650 | Not Available | Negative | 3916910 - 3917287 | 14736.9 |
| mbl fold metallo-hydrolase | A5893_16655 | Not Available | Positive | 3917434 - 3918837 | 52344.4 |
| peptidase m28 | A5893_16660 | Not Available | Positive | 3919189 - 3920538 | 49866.1 |
| pseudouridine synthase | A5893_16665 | Not Available | Positive | 3920554 - 3921357 | 31088.5 |
| hypothetical protein | A5893_16670 | Not Available | Negative | 3921479 - 3924226 | 102111.0 |
| hypothetical protein | A5893_16675 | Not Available | Negative | 3924308 - 3925090 | 27864.2 |
| dna-binding response regulator | A5893_16680 | Not Available | Negative | 3925258 - 3925971 | 27593.8 |
| hypothetical protein | A5893_16685 | Not Available | Negative | 3925964 - 3926989 | 39578.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
