Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16540 | Not Available | Positive | 3892338 - 3893078 | 26593.2 |
| hypothetical protein | A5893_16545 | Not Available | Positive | 3893170 - 3893604 | 17131.4 |
| hypothetical protein | A5893_16550 | Not Available | Negative | 3893767 - 3893997 | 8648.98 |
| hypothetical protein | A5893_16555 | Not Available | Positive | 3894211 - 3894936 | 26474.0 |
| hypothetical protein | A5893_16560 | Not Available | Positive | 3895069 - 3895647 | 20074.1 |
| sulfate adenylyltransferase | A5893_16565 | Not Available | Negative | 3895737 - 3896984 | 46394.6 |
| sulfate adenylyltransferase small subunit | A5893_16570 | Not Available | Negative | 3896984 - 3897874 | 33962.3 |
| phosphoadenosine phosphosulfate reductase | A5893_16575 | Not Available | Negative | 3898008 - 3898730 | 28062.2 |
| siroheme synthase | A5893_16580 | Not Available | Negative | 3898865 - 3900382 | 54989.1 |
| uroporphyrin-iii methyltransferase | A5893_16585 | Not Available | Negative | 3900360 - 3901127 | 27446.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
