Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthetase | A5893_16490 | Not Available | Negative | 3878271 - 3879611 | 51587.4 |
| hypothetical protein | A5893_16495 | Not Available | Positive | 3879662 - 3881782 | 80146.0 |
| hypothetical protein | A5893_16500 | Not Available | Positive | 3881840 - 3882343 | 19264.3 |
| hypothetical protein | A5893_16505 | Not Available | Positive | 3882346 - 3882612 | 9720.83 |
| aspartate--trna ligase | A5893_16510 | Not Available | Positive | 3882836 - 3884626 | 67827.0 |
| hypothetical protein | A5893_16515 | Not Available | Negative | 3884727 - 3886520 | 68353.2 |
| aminopeptidase | A5893_16520 | Not Available | Negative | 3886711 - 3888576 | 70467.4 |
| hypothetical protein | A5893_16525 | Not Available | Negative | 3888586 - 3889824 | 45340.8 |
| rna polymerase subunit sigma-70 | A5893_16530 | Not Available | Negative | 3889808 - 3890383 | 22566.5 |
| hypothetical protein | A5893_16535 | Not Available | Positive | 3890477 - 3892345 | 68414.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
