Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16440 | Not Available | Negative | 3867908 - 3869254 | 48610.5 |
| preprotein translocase | A5893_16445 | Not Available | Positive | 3869385 - 3869798 | 15936.1 |
| n-acyl-l-amino acid amidohydrolase | A5893_16450 | Not Available | Positive | 3869791 - 3870984 | 43465.3 |
| hypothetical protein | A5893_16455 | Not Available | Positive | 3871069 - 3872019 | 36822.1 |
| glutamyl-trna reductase | A5893_16460 | Not Available | Positive | 3872136 - 3873365 | 46766.5 |
| atp-dependent exodnase (exonuclease v) alpha subunit - helicase superfamily i member | A5893_16465 | Not Available | Negative | 3873414 - 3874190 | 29598.5 |
| hypothetical protein | A5893_16470 | Not Available | Negative | 3874219 - 3874734 | 19335.5 |
| peptidylprolyl isomerase | A5893_16475 | Not Available | Negative | 3874801 - 3876900 | 76228.5 |
| hypothetical protein | A5893_16480 | Not Available | Positive | 3877110 - 3877781 | 26498.5 |
| hypothetical protein | A5893_16485 | Not Available | Negative | 3877786 - 3878268 | 18610.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
