Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mercuric reductase | A5893_16390 | Not Available | Negative | 3856577 - 3857953 | 50381.1 |
| hypothetical protein | A5893_16395 | Not Available | Negative | 3858074 - 3858310 | 9161.06 |
| transcriptional regulator | A5893_16400 | Not Available | Negative | 3858376 - 3858852 | 17892.9 |
| hypothetical protein | A5893_16405 | Not Available | Positive | 3859279 - 3859953 | 24814.3 |
| hypothetical protein | A5893_16410 | Not Available | Negative | 3860166 - 3860588 | 16708.0 |
| protein tyrosine phosphatase | A5893_16415 | Not Available | Negative | 3860613 - 3861059 | 16994.5 |
| dead/deah box helicase | A5893_16420 | Not Available | Negative | 3861073 - 3862383 | 48354.5 |
| hypothetical protein | A5893_16425 | Not Available | Positive | 3862730 - 3863218 | 18137.3 |
| preprotein translocase subunit seca | A5893_16430 | Not Available | Positive | 3863401 - 3866712 | 124384.0 |
| hypothetical protein | A5893_16435 | Not Available | Negative | 3866797 - 3867900 | 35826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
