Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16340 | Not Available | Negative | 3845026 - 3845775 | 28407.8 |
| hemagglutinin | A5893_16345 | Not Available | Negative | 3845777 - 3846604 | 31498.5 |
| hemagglutinin | A5893_16350 | Not Available | Negative | 3846601 - 3847263 | 25240.3 |
| methyltransferase | A5893_16355 | Not Available | Negative | 3847299 - 3847934 | 23974.0 |
| 50s ribosomal protein l25/general stress protein ctc | A5893_16360 | Not Available | Negative | 3848060 - 3848644 | 21469.2 |
| ribose-phosphate pyrophosphokinase | A5893_16365 | Not Available | Negative | 3848663 - 3849604 | 34135.4 |
| Trna-gln | Not Available | Not Available | Positive | 3849677 - 3849747 | Not Available |
| multidrug transporter | A5893_16375 | Not Available | Positive | 3850171 - 3853200 | 114390.0 |
| rna-binding transcriptional accessory protein | A5893_16380 | Not Available | Positive | 3853476 - 3855767 | 85024.4 |
| dna mismatch repair protein mutt | A5893_16385 | Not Available | Positive | 3856024 - 3856575 | 20856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
