Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16290 | Not Available | Negative | 3836713 - 3837360 | 25838.2 |
| hypothetical protein | A5893_16295 | Not Available | Negative | 3837361 - 3837819 | 17364.7 |
| acyl dehydratase | A5893_16300 | Not Available | Negative | 3837953 - 3838414 | 17497.2 |
| hypothetical protein | A5893_16305 | Not Available | Positive | 3838602 - 3839246 | 24294.3 |
| transporter | A5893_16310 | Not Available | Positive | 3839284 - 3840591 | 48314.9 |
| secretion protein hlyd | A5893_16315 | Not Available | Positive | 3840612 - 3841658 | 37940.1 |
| mfs transporter | A5893_16320 | Not Available | Positive | 3841665 - 3843212 | 56452.1 |
| alkylhydroperoxidase | A5893_16325 | Not Available | Negative | 3843433 - 3844014 | 21866.4 |
| alkyl hydroperoxide reductase | A5893_16330 | Not Available | Negative | 3844098 - 3844655 | 20962.7 |
| hypothetical protein | A5893_16335 | Not Available | Positive | 3844809 - 3845024 | 8220.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
