Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16240 | Not Available | Negative | 3819130 - 3821868 | 98324.9 |
| hypothetical protein | A5893_16245 | Not Available | Negative | 3821976 - 3823886 | 66986.3 |
| gntr family transcriptional regulator | A5893_16250 | Not Available | Negative | 3824265 - 3825008 | 28228.2 |
| pectate lyase | A5893_16255 | Not Available | Negative | 3825011 - 3826432 | 52554.1 |
| pectate lyase | A5893_16260 | Not Available | Negative | 3826442 - 3827953 | 54014.5 |
| hypothetical protein | A5893_16265 | Not Available | Negative | 3828019 - 3829647 | 58250.7 |
| carbohydrate-binding protein susd | A5893_16270 | Not Available | Negative | 3829667 - 3831439 | 66274.4 |
| susc/raga family protein | A5893_16275 | Not Available | Negative | 3831461 - 3834646 | 116780.0 |
| laci family transcriptional regulator | A5893_16280 | Not Available | Positive | 3834965 - 3835972 | 37649.2 |
| hypothetical protein | A5893_16285 | Not Available | Negative | 3835976 - 3836743 | 29069.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
