Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | A5893_16185 | Not Available | Positive | 3802564 - 3804036 | 54761.6 |
| hypothetical protein | A5893_16190 | Not Available | Negative | 3804138 - 3804470 | 12263.8 |
| glucuronyl hydrolase | A5893_16200 | Not Available | Negative | 3804917 - 3806869 | 73912.1 |
| glycoside hydrolase | A5893_16205 | Not Available | Negative | 3806870 - 3808540 | 60695.7 |
| hypothetical protein | A5893_16210 | Not Available | Negative | 3808868 - 3809815 | 35730.9 |
| pectin esterase | A5893_16215 | Not Available | Negative | 3809854 - 3810798 | 35493.8 |
| pectin esterase | A5893_16220 | Not Available | Negative | 3810795 - 3811778 | 36769.0 |
| hypothetical protein | A5893_16225 | Not Available | Negative | 3811788 - 3812927 | 41476.0 |
| glycoside hydrolase | A5893_16230 | Not Available | Negative | 3812938 - 3814542 | 60534.7 |
| hypothetical protein | A5893_16235 | Not Available | Negative | 3814707 - 3819068 | 153480.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
