Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s ferredoxin | A5893_16135 | Not Available | Negative | 3788006 - 3788644 | 23104.8 |
| haloacid dehalogenase | A5893_16140 | Not Available | Negative | 3788871 - 3789524 | 24659.4 |
| cyclopropane-fatty-acyl-phospholipid synthase | A5893_16145 | Not Available | Negative | 3789674 - 3790789 | 43328.9 |
| Trna-ser | Not Available | Not Available | Positive | 3791054 - 3791143 | Not Available |
| hypothetical protein | A5893_16155 | Not Available | Negative | 3791251 - 3793740 | 88625.4 |
| hypothetical protein | A5893_16160 | Not Available | Negative | 3794634 - 3795704 | 38943.9 |
| hypothetical protein | A5893_16165 | Not Available | Positive | 3796159 - 3797331 | 41806.3 |
| hypothetical protein | A5893_16170 | Not Available | Positive | 3797579 - 3799822 | 82642.4 |
| hypothetical protein | A5893_16175 | Not Available | Positive | 3799981 - 3801048 | 38940.4 |
| hypothetical protein | A5893_16180 | Not Available | Positive | 3801203 - 3802519 | 49880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
