Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16030 | Not Available | Negative | 3767135 - 3767704 | 20543.9 |
| mbl fold metallo-hydrolase | A5893_16035 | Not Available | Negative | 3767974 - 3769365 | 51273.7 |
| sam-dependent methyltransferase | A5893_16040 | Not Available | Negative | 3769451 - 3770047 | 22990.6 |
| permease | A5893_16045 | Not Available | Negative | 3770044 - 3770838 | 29049.1 |
| transcriptional regulator | A5893_16050 | Not Available | Negative | 3770838 - 3771149 | 11870.8 |
| hypothetical protein | A5893_16055 | Not Available | Positive | 3771288 - 3771980 | 26021.5 |
| hypothetical protein | A5893_16060 | Not Available | Positive | 3772022 - 3775024 | 111011.0 |
| hypothetical protein | A5893_16065 | Not Available | Positive | 3775034 - 3776020 | 37795.4 |
| nucleoside hydrolase | A5893_16070 | Not Available | Positive | 3776153 - 3777085 | 35426.3 |
| hypothetical protein | A5893_16075 | Not Available | Negative | 3777163 - 3777864 | 27174.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
