Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_15980 | Not Available | Negative | 3758093 - 3760177 | 78470.3 |
| beta-ketoacyl-acp reductase | A5893_15985 | Not Available | Negative | 3760300 - 3761043 | 26563.0 |
| hypothetical protein | A5893_15990 | Not Available | Negative | 3761244 - 3761447 | 7992.76 |
| excinuclease abc subunit a | A5893_15995 | Not Available | Negative | 3761497 - 3764355 | 106247.0 |
| hypothetical protein | A5893_16000 | Not Available | Positive | 3764530 - 3764961 | 16245.5 |
| thiol reductase thioredoxin | A5893_16005 | Not Available | Negative | 3764962 - 3765258 | 11213.9 |
| hypothetical protein | A5893_16010 | Not Available | Negative | 3765356 - 3765535 | 7075.21 |
| hypothetical protein | A5893_16015 | Not Available | Negative | 3765532 - 3765798 | 10565.0 |
| hypothetical protein | A5893_16020 | Not Available | Negative | 3765780 - 3766640 | 34503.2 |
| transporter | A5893_16025 | Not Available | Negative | 3766644 - 3767135 | 18086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
