Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | A5893_15880 | Not Available | Negative | 3725600 - 3726769 | 44237.3 |
| glycoside hydrolase | A5893_15885 | Not Available | Negative | 3726772 - 3729231 | 93295.7 |
| hypothetical protein | A5893_15890 | Not Available | Negative | 3729511 - 3731328 | 66553.6 |
| hypothetical protein | A5893_15895 | Not Available | Negative | 3731394 - 3734648 | 118044.0 |
| hybrid sensor histidine kinase/response regulator | A5893_15900 | Not Available | Negative | 3734973 - 3739004 | 153683.0 |
| oxidoreductase | A5893_15905 | Not Available | Negative | 3739049 - 3739801 | 26405.6 |
| mfs transporter | A5893_15910 | Not Available | Negative | 3739803 - 3741098 | 47831.3 |
| coagulation factor 5/8 type domain-containing protein | A5893_15915 | Not Available | Negative | 3741103 - 3742119 | 36348.6 |
| cupin | A5893_15920 | Not Available | Negative | 3742405 - 3742743 | 12772.3 |
| heparinase | A5893_15925 | Not Available | Negative | 3742750 - 3744885 | 80589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
