Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | A5893_15830 | Not Available | Positive | 3714909 - 3715964 | 40628.7 |
| purine-nucleoside phosphorylase | A5893_15835 | Not Available | Positive | 3715945 - 3716760 | 30025.8 |
| hypothetical protein | A5893_15840 | Not Available | Positive | 3716793 - 3718820 | 79061.8 |
| hypothetical protein | A5893_15845 | Not Available | Positive | 3719252 - 3719683 | 15848.0 |
| hypothetical protein | A5893_15850 | Not Available | Positive | 3719711 - 3720241 | 19542.1 |
| gh3 auxin-responsive promoter | A5893_15855 | Not Available | Positive | 3720323 - 3721864 | 58387.5 |
| hypothetical protein | A5893_15860 | Not Available | Negative | 3721877 - 3722506 | 23798.1 |
| hypothetical protein | A5893_15865 | Not Available | Positive | 3722646 - 3722864 | 8379.89 |
| alginate lyase | A5893_15870 | Not Available | Negative | 3722865 - 3724178 | 48740.4 |
| glucuronyl hydrolase | A5893_15875 | Not Available | Negative | 3724180 - 3725376 | 45413.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
